BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012F04LP1|AL426392
(790 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1668 1518 0.0
>3x_Contig1668
Length = 13429
Score = 1518 bits (764), Expect = 0.0
Identities = 767/770 (99%)
Strand = Plus / Plus
Query: 21 cataatcactgccagaatcacaatccacaaaatagtatcctgaactggaagagtacgtag 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8203 cataatcactgccagaatcacaatccacaaaatagtatcctgaactggaagagtacgtag 8262
Query: 81 cactaacagaacttgcaatggcagcagctaaactacttgggaagtaacagaatgtggcac 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8263 cactaacagaacttgcaatggcagcagctaaactacttgggaagtaacagaatgtggcac 8322
Query: 141 cagtgtctagcaatgcagggtacttagtctgtgtcacagtctcgttaccataactgctcg 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8323 cagtgtctagcaatgcagggtacttagtctgtgtcacagtctcgttaccataactgctcg 8382
Query: 201 tcacaccgataccttgtagagtgatcgataatctaatctgttcagtgtagcctatgcttc 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8383 tcacaccgataccttgtagagtgatcgataatctaatctgttcagtgtagcctatgcttc 8442
Query: 261 tgagagcgttgaccattggaacggtgtacaacgtacctgtatatttgctgtgatcgacgg 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8443 tgagagcgttgaccattggaacggtgtacaacgtacctgtatatttgctgtgatcgacgg 8502
Query: 321 caccgaataagatagaaccagaatccgcatctaagtcattcaagaaaacagaatatgcat 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8503 caccgaataagatagaaccagaatccgcatctaagtcattcaagaaaacagaatatgcat 8562
Query: 381 tcttttcgatgacgccgtttctttgcmacacgatagggaagttatcgtattgatagcggt 440
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 8563 tcttttcgatgacgccgtttctttgcaacacgatagggaagttatcgtattgatagcggt 8622
Query: 441 tgtaggtgcttaactgaccggaataagtggattcagaacctgtcaatccaatacctaaga 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8623 tgtaggtgcttaactgaccggaataagtggattcagaacctgtcaatccaatacctaaga 8682
Query: 501 caccgaattgggaatctgtgtagttcgagacagcaaagctgagccccgtgacgttgacat 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8683 caccgaattgggaatctgtgtagttcgagacagcaaagctgagccccgtgacgttgacat 8742
Query: 561 cgtccaagtgaatttcatctacaccccaatcaccatcagcaaaggtaccatccgcgtaag 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8743 cgtccaagtgaatttcatctacaccccaatcaccatcagcaaaggtaccatccgcgtaag 8802
Query: 621 agatatagamtctagtgtcatttgattgccaagaagacgactttgacgtgtcgaaagtac 680
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8803 agatatagaatctagtgtcatttgattgccaagaagacgactttgacgtgtcgaaagtac 8862
Query: 681 caaactcagaacaatccaaagtggccaggcttgatgggacagatcttatagaagtagcag 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8863 caaactcagaacaatccaaagtggccaggcttgatgggacagatcttatagaagtagcag 8922
Query: 741 ccactgtacccgatgtgagtgcagtaggaactgtttgcgtaccagmacta 790
||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 8923 ccactgtacccgatgtgagtgcagtaggaactgtttgcgtaccagcacta 8972
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3952
Number of Sequences: 1807
Number of extensions: 3952
Number of successful extensions: 21
Number of sequences better than 1.0e-20: 1
length of query: 790
length of database: 10,358,551
effective HSP length: 16
effective length of query: 774
effective length of database: 10,329,639
effective search space: 7995140586
effective search space used: 7995140586
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)